Metal Pincers as Antiviral Agents Targeting SARS-CoV-2 Spike Protein
Date
2023-08
Authors
Journal Title
Journal ISSN
Volume Title
Publisher
University of the Witwatersrand, Johannesburg
Abstract
The purpose of this work was to prove the concept that complexes of bioavailable metal ions may be designed to target specific solvent-exposed amino acid residues on therapeutic protein targets. The complexes synthesized and studied were novel Zn(II) and Cu(II) NNN amide pincers. The chelates were designed by in silico methods to target solvent-exposed tyrosine residues on the receptor binding domain of SARS-CoV-2. These tyrosine residues are crucial for binding host cell receptors and by targeting these groups, the metal pincers may potentially act as antiviral fusion inhibitors for the treatment of COVID-19. Biophysical studies were carried out to determine the binding affinity between the chelate and phenolic residues. These studies identified the most likely binding site for the metal complex on the SARS-CoV-2 spike protein epitope. The novel chelates were crystalized and found to adopt hexameric metallocycle architecture.
Description
A research report submitted in partial fulfilment of the requirements for the Degree of Master of Science, School of Chemistry, at the University of the Witwatersrand, Johannesburg, 2023.
Keywords
Inorganic chemistry, Biochemistry metal complexes, Pincers supramolecular chemistry, XRD, SARS-CoV-2, COVID-19, Fusion inhibitors, Fluorescence, CD DFT docking dynamics, Schrodinger, Spike protein, UCTD
Citation
Bracken, Matthew Lee. (2023). Metal Pincers as Antiviral Agents Targeting SARS-CoV-2 Spike Protein. [Master's dissertation, University of the Witwatersrand, Johannesburg]. https://hdl.handle.net/10539/41648