Wits Evolutionary Studies Institute (ESI)
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Item Discovering Hominins - Application of Medical Computed Tomography (CT) to Fossil-Bearing Rocks from the Site of Malapa, South Africa.(Public Library of Science, 2015-12-18) Smilg, J.S.; Berger, L.R.; Smilg, Jacqueline S.In the South African context, computed tomography (CT) has been used applied to individually prepared fossils and small rocks containing fossils, but has not been utilized on large breccia blocks as a means of discovering fossils, and particularly fossil hominins. Previous attempts at CT imaging of rocks from other South African sites for this purpose yielded disappointing results. For this study, 109 fossil- bearing rocks from the site of Malapa, South Africa were scanned with medical CT prior to manual preparation. The resultant images were assessed for accuracy of fossil identification and characterization against the standard of manual preparation. The accurate identification of fossils, including those of early hominins, that were not visible on the surface of individual blocks, is shown to be possible. The discovery of unexpected fossils is reduced, thus lowering the potential that fossils could be damaged through accidental encounter during routine preparation, or even entirely missed. This study should significantly change the way fossil discovery, recovery and preparation is done in the South African context and has potential for application in other palaeontological situations. Medical CT imaging is shown to be reliable, readily available, cost effective and accurate in finding fossils within matrix conglomerates. Improvements in CT equipment and in CT image quality are such that medical CT is now a viable imaging modality for this palaeontological application.Item Youngest dinocephalian fossils extend the Tapinocephalus Zone, Karoo Basin, South Africa.(Academy of Science of South Africa (ASSAf), 2015-03-01) Day, M.O.; Guven, S.; Abdala, F.; Jirah, S.; Rubidge, B.; Almond, J.The dinocephalians (Synapsida, Therapsida) were one of the dominant tetrapod groups of the Middle Permian (Guadalupian Epoch, ∼270-260 million years ago) and are most abundantly recorded in the Tapinocephalus Assemblage Zone (AZ) of the Main Karoo Basin, South Africa. Dinocephalians are thought to have become extinct near the top of the Abrahamskraal Formation of the Beaufort Group and their disappearance is one criterion used to define the base of the overlying Pristerognathus AZ. Because of the abundance of fossils in the Karoo, the Beaufort Group biozones form the biostratigraphic standard for later Permian terrestrial tetrapod ecosystems, so their stratigraphic delineation is of great importance to Permian palaeobiology. We report two new specimens of the rare tapinocephalid dinocephalian Criocephalosaurus from the lowermost Poortjie Member, which makes them the youngest dinocephalians known from the Main Karoo Basin and extends the Tapinocephalus AZ from the Abrahamskraal Formation up into the Teekloof Formation. The extension of the Tapinocephalus AZ relative to the lithostratigraphy potentially affects the biozone or biozones to which a fossil species can be attributed; this extension has implications for biostratigraphic correlations within the Main Karoo Basin as well as with other basins across Gondwana. These discoveries also indicate that a population of herbivorous tapinocephalids survived as rare constituents of the tetrapod fauna after most generic richness within the clade had already been lost.Item Use of wood anatomy to identify poisonous plants: Charcoal of Spirostachys africana.(Academy of Science of South Africa (ASSAf), 2015-03-01) Lennox, S.J.; Bamford, M.Spirostachys africana Sond. (tamboti/tambotie) is a woodland tree that is often found near water. It has a poisonous and purgative latex. The archaeological site of Sibudu, a rock shelter in KwaZulu-Natal, has evidence, from well-preserved charcoal and seeds, of past environments and wood use from approximately 77-38 thousand years ago (ka). As their uses and environmental indicators are different, it is critical to confidently distinguish among the three anatomically similar woods of the Euphorbiaceae: Spirostachys africana, Sclerocroton integerrimus and Shirakiopsis elliptica. A detailed anatomical study of reference and archaeological charcoal shows that xylem vessel width increases proportionally as vessel frequency decreases, from Spirostachys africana, Sclerocroton integerrimus to Shirakiopsis elliptica. Crystals of calcium oxalate are present in ray cells of Spirostachys africana, whereas silica bodies are present in ray cells of Sclerocroton integerrimus and Shirakiopsis elliptica. Using these features, the presence of Spirostachys africana was confirmed amongst hearth charcoal of the Spotty Camel layer, with an age of approximately 58 ka and of the Mottled Deposit occupational layer, with an age of approximately 49 ka. The presence of this charcoal, collected from ancient fireplaces or sieved from surrounding sediments, implies that people at Sibudu understood and used this poisonous tree to their advantage. We are encouraged in this view by the presence of many Cryptocarya woodii leaves found on the surface of 77-ka sedge bedding at Sibudu (Wadley L et al., Science. 2011;334:1388-1391). Cryptocarya woodii has insecticidal and larvacidal properties and members of the Laurel family are well known for their medicinal properties.Item Putting fossils on the map: Applying a geographical information system to heritage resources(Academic of Science of South Africa (ASSAf)., 2015-12) Van ver Walt, M.; Cooper, A.K.; Netterberg, I.; Rubidge, B.S.A geographical information system (GIS) database was compiled of Permo-Triassic tetrapod fossils from the Karoo Supergoup in South African museum collections. This database is the first of its kind and has great time applicability for understanding tetrapod biodiversity change though time more than 200 million years ago. Because the museum catalogues all differed in recorded information and were not compliant with field capture requirements, this information had to be standardised to a format that could be utilised for archival and research application. Our paper focuses on the processes involved in building the GIS project, capturing metadata on fossil collections and formulating future best practices. The result is a multi-layered GIS database of the tetrapod fossil record of the Beaufort Group of South Africa for use as an accurate research tool in palaeo- and geoscience research with applications for ecology, ecosystems, stratigraphy and basin development.Item Traditional glue, adhesive and poison used for composite weapons by ju/'hoan san in nyae nyae, Namibia. implications for the evolution of hunting equipment in prehistory.(Public Library of Science, 2015-10) Wadley, L.; Trower, G.; Backwell, L.; D'Errico, F.Ju/'hoan hunters from Nyae Nyae, near Tsumkwe in Namibia, demonstrate the manufacture of three fixative pastes made from plant extracts, and poison made from grubs and plant extracts. Ammocharis coranica and Terminalia sericea produce simple glue. Ozoroa schinzii latex mixed with carbonized Aristeda adscensionis grass is a compound adhesive. Composite poison is made from Chrysomelid grub viscera mixed with salivary extracts of Acacia mellifera inner bark and the tuber sap of Asparagus exuvialis. In order to document potential variability in the chaîne opératoire, and to eliminate inherent biases associated with unique observations, we studied manufacturing processes in three separate Nyae Nyae villages. Although there are methodological similarities in the Nyae Nyae area, we observed a few differences in contemporary traditions of poison manufacture. For example, some hunters make powder from Asparagus exuvialis tuber sap by boiling, reducing, hardening and grinding it, while others simply use heated sap. The Ju/'hoan hunting kit provides insights for archaeologists, but we must exercise caution when looking for continuity between prehistoric and historical technical systems. Some traditions have been lost to modern hunters, while others are new. We should also expect variability in the Stone Age because of geographically restricted resources. Simple glue, compound adhesive, and poison recipes identified in the Stone Age have no modern equivalents. By about 60,000 years ago at Diepkloof, simple glue was used for hafting tools, but at similarly-aged Sibudu there are recipes that combine red ochre powder with plant and/or animal ingredients. At Border Cave, novel poisons and compound adhesives were used in the Early Later Stone Age. It is possible that the complexity that we record in the manufacture of fixative pastes and poison used by Ju/'hoan hunters represents a hafting system both similar to and different from that observed at the Stone Age sites of Diepkloof, Sibudu, and Border Cave.Item Cortical Structure of Hallucal Metatarsals and Locomotor Adaptations in Hominoids(Public Library of Science, 2015-01-30) Jashashvili, T.; Dowdeswell, M.R.; Lebrun, R.; Carlson, K.J.Diaphyseal morphology of long bones, in part, reflects in vivo loads experienced during the lifetime of an individual. The first metatarsal, as a cornerstone structure of the foot, presumably expresses diaphyseal morphology that reflects loading history of the foot during stance phase of gait. Human feet differ substantially from those of other apes in terms of loading histories when comparing the path of the center of pressure during stance phase, which reflects different weight transfer mechanisms. Here we use a novel approach for quantifying continuous thickness and cross-sectional geometric properties of long bones in order to test explicit hypotheses about loading histories and diaphyseal structure of adult chimpanzee, gorilla, and human first metatarsals. For each hallucal metatarsal, 17 cross sections were extracted at regularly-spaced intervals (2.5% length) between 25% and 65% length. Cortical thickness in cross sections was measured in one degree radially-arranged increments, while second moments of area were measured about neutral axes also in one degree radially-arranged increments. Standardized thicknesses and second moments of area were visualized using false color maps, while penalized discriminant analyses were used to evaluate quantitative species differences. Humans systematically exhibit the thinnest diaphyseal cortices, yet the greatest diaphyseal rigidities, particularly in dorsoplantar regions. Shifts in orientation of maximum second moments of area along the diaphysis also distinguish human hallucal metatarsals from those of chimpanzees and gorillas. Diaphyseal structure reflects different loading regimes, often in predictable ways, with human versus non-human differences probably resulting both from the use of arboreal substrates by non-human apes and by differing spatial relationships between hallux position and orientation of the substrate reaction resultant during stance. The novel morphological approach employed in this study offers the potential for transformative insights into form-function relationships in additional long bones, including those of extinct organisms (e.g., fossils).Item Taphonomic analysis of the faunal assemblage associated with the hominins (Australopithecus sediba) from the early pleistocene cave deposits of Malapa, South Africa.(Public Library of Science, 2015-06-10) Val, A.; Dirks, P.H.G.M.; Backwell, L.R.; Berger, L.R.; D'Errico, F.Here we present the results of a taphonomic study of the faunal assemblage associated with the hominin fossils (Australopithecus sediba) from the Malapa site. Results include estimation of body part representation, mortality profiles, type of fragmentation, identification of breakage patterns, and microscopic analysis of bone surfaces. The diversity of the faunal spectrum, presence of animals with climbing proclivities, abundance of complete and/or articulated specimens, occurrence of antimeric sets of elements, and lack of carnivore-modified bones, indicate that animals accumulated via a natural death trap leading to an area of the cave system with no access to mammalian scavengers. The co-occurrence of well preserved fossils, carnivore coprolites, deciduous teeth of brown hyaena, and some highly fragmented and poorly preserved remains supports the hypothesis of a mixing of sediments coming from distinct chambers, which collected at the bottom of the cave system through the action of periodic water flow. This combination of taphonomic features explains the remarkable state of preservation of the hominin fossils as well as some of the associated faunal material.Item Papio cranium from the hominin-bearing site of Malapa: Implications for the evolution of modern baboon cranial morphology and South African Plio-Pleistocene biochronology.(Public Library of Science, 2015-08-19) Gilbert, C.C.; Steininger, C.M.; Kibii, J.M.; Berger, L.R.A new partial cranium (UW 88-886) of the Plio-Pleistocene baboon Papio angusticeps from Malapa is identified, described and discussed. UW 88-886 represents the only non-hominin primate yet recovered from Malapa and is important both in the context of baboon evolution as well as South African hominin site biochronology. The new specimen may represent the first appearance of modern baboon anatomy and coincides almost perfectly with molecular divergence date estimates for the origin of the modern P. hamadryas radiation. The fact that the Malapa specimen is dated between ~2.026–2.36 million years ago (Ma) also has implications for the biochronology of other South African Plio-Pleistocene sites where P. angusticeps is found.Item Homo naledi, a new species of the genus Homo from the Dinaledi Chamber, South Africa.(eLife Sciences Publications Ltd, 2015-09) Berger, L.R.; Hawks, J; de Ruiter, D.J; Wei, P.; Zipfel, B.; Churchill, S.E.; Schmid, P.; Delezene, L.K.; Kivell, T.L.; Garvin, H.M.; Williams, S.A.; DeSilva, J.M.; Skinner, M.M.; Musiba, C.M.; Cameron, N.; Holliday, T.W.; Harcourt-Smith, W.; Ackermann, R.R.; Bastir, M.; Bogin, B.; Bolter, D.; Brophy, J.; Cofran, Z.D.; Congdon, K.A.; Deane, A.S.; Dembo, M.; Drapeau, M.; Elliott, M.C.; Feuerriegel, E.M.; Garcia-Martinez, D.; Green, D.J.; Gurtov, A.; Irish, J.D.; Kruger, A.; Laird, M.F.; Marchi, D.; Meyer, M.R.; Nalla, S.; Negash, E.W.; Orr, C.M.; Radovcic, D.; Schroeder, L.; Scott, J.E.; Throckmorton, Z.; Tocheri, M.W.; VanSickle, C.; Walker, C.S.Homo naledi is a previously-unknown species of extinct hominin discovered within the Dinaledi Chamber of the Rising Star cave system, Cradle of Humankind, South Africa. This species is characterized by body mass and stature similar to small-bodied human populations but a small endocranial volume similar to australopiths. Cranial morphology of H. naledi is unique, but most similar to early Homo species including Homo erectus, Homo habilis or Homo rudolfensis. While primitive, the dentition is generally small and simple in occlusal morphology. H. naledi has humanlike manipulatory adaptations of the hand and wrist. It also exhibits a humanlike foot and lower limb. These humanlike aspects are contrasted in the postcrania with a more primitive or australopith-like trunk, shoulder, pelvis and proximal femur. Representing at least 15 individuals with most skeletal elements repeated multiple times, this is the largest assemblage of a single species of hominins yet discovered in Africa.Item Geological and taphonomic context for the new hominin species Homo naledi from the Dinaledi Chamber, South Africa.(eLife Sciences Publications Ltd, 2015-09) Dirks, P.H.G.M.; Berger, L.R.; Roberts, E.M.; Peixotto, B.; Tucker, S.; Kramers, J.D.; Hawks, J.; Randolph-Quinney, P.S.; Elliott, M.; Musiba, C.M.; Churchill, S.; de Ruiter, D.J.; Schmid, P.; Backwell, L.R.; Belyanin, G.A.; Boshoff, P.; Hunter, K.L.; Feuerriegel, E.M.; Gurtov, A.; Harrison, J.G.; Hunter, R.; Kruger, A.; Morris, H.; Makhubela, T.V.We describe the physical context of the Dinaledi Chamber within the Rising Star cave, South Africa, which contains the fossils of Homo naledi. Approximately 1550 specimens of hominin remains have been recovered from at least 15 individuals, representing a small portion of the total fossil content. Macro-vertebrate fossils are exclusively H. naledi, and occur within clay-rich sediments derived from in situ weathering, and exogenous clay and silt, which entered the chamber through fractures that prevented passage of coarser-grained material. The chamber was always in the dark zone, and not accessible to non-hominins. Bone taphonomy indicates that hominin individuals reached the chamber complete, with disarticulation occurring during/after deposition. Hominins accumulated over time as older laminated mudstone units and sediment along the cave floor were eroded. Preliminary evidence is consistent with deliberate body disposal in a single location, by a hominin species other than Homo sapiens, at an as-yet unknown date.
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